Life in a crowded world.
نویسندگان
چکیده
Introduction Macromolecules are present as soluble species and/or structural arrays at total concentrations of up to several hundred grams per litre in essentially all physiological compartments. Although local composition varies widely between different systems, it is evident that most macromolecular reactions and processes in vivo—as opposed to typical experiments in vitro in which the total concentration of macromolecules rarely surpasses 1gl−1 (Ralston, 1990; Ellis, 2001)— take place in environments in which macromolecules occupy a considerable fraction (between 10% and 40%) of the total volume (Fulton, 1982; Record et al, 1998). These media are termed ‘crowded’ or ‘volume-occupied’ rather than ‘concentrated’, because no single species of macromolecule is necessarily present at a high concentration. The term ‘macromolecular crowding’ connotes the non-specific influence of steric repulsions on specific reactions and processes that occur in highly volume-occupied media. During recent decades it has gradually become recognized that crowding can considerably alter the reactivity of individual macromolecules, both qualitatively and quantitatively. Crowding can be mimicked experimentally by adding high concentrations of inert synthetic or natural macromolecules, termed crowding agents or crowders, to the system in vitro (Ellis, 2001). Experimental and theoretical work has demonstrated substantial (order-of-magnitude) effects of crowding on a broad range of biochemical, biophysical and physiological processes, including—but not limited to—nucleic acid and protein conformation and stability, protein–protein and protein–DNA association equilibria and kinetics (including protein crystallization, protein fibre formation and bundling), catalytic activity of enzymes and cell volume regulation (Zimmerman & Minton, 1993; Minton 1997, 2001; Ellis, 2001). The fact that biological macromolecules have evolved to function in such crowded environments raises biologically important questions. Why did cells evolve such a highly packed interior? Are there any advantages in being crowded? How do macromolecules fold, associate and travel through the crowded intracellular medium? (Fulton, 1982; Zimmerman & Minton, 1993; Bray, 1998). The first international workshop on the Biological Implications of Macromolecular Crowding brought together a group of 60 theoreticians and experimentalists to exchange ideas on topics that fell into three categories: first, theoretical predictions of the effects of excluded volume on the rates and/or equilibria of macromolecular reactions; second, experimental and simulation approaches that can be applied to the quantitative characterization of biochemical and biophysical processes in crowded media, both in vitro and in vivo; and last, experimental findings that indicate that a broad variety of biological phenomena and systems are likely to be substantially influenced by crowding. As many aspects of the theory of crowding are already well developed, this opportunity for interdisciplinary exchange came at a particularly appropriate time. Some conferences resemble medieval jousting matches during which opponents try to unseat their counterparts in well-known controversies; others are like marketplaces where proponents of new ideas, new theories and new experimental techniques present their ‘wares’ for acquisition by others who may find that they fill a particular need. Despite the dramatic venue of the conference (namely, a castle in Avila), this meeting had more in common with the market than the tournament. A community of interest that really did not exist before the workshop was assembled, and the
منابع مشابه
Online multiple people tracking-by-detection in crowded scenes
Multiple people detection and tracking is a challenging task in real-world crowded scenes. In this paper, we have presented an online multiple people tracking-by-detection approach with a single camera. We have detected objects with deformable part models and a visual background extractor. In the tracking phase we have used a combination of support vector machine (SVM) person-specific classifie...
متن کاملSeroepidemiology of Hepatitis A in Population under 30 years old in Rural Area of Zabol
Abstract Hepatitis A , like any other intestinal diseases, is common across the world. But its prevalence and epidemiological feature vary according to sanitation and crowded of people. This study which was conducted in the spring of 1377 (1998) aims at the evaluation of epidemiologic pattern of hepatitis A in Zabol. 229 people from rural area of Zabol were randomly selecteted and investigated...
متن کاملSpatio-Temporal Motion Pattern Modeling of Extremely Crowded Scenes
The abundance of video surveillance systems has created a dire need for computational methods that can assist or even replace human operators. Research in this field, however, has yet to tackle an important real-world scenario: extremely crowded scenes. The excessive amount of people and their activities in extremely crowded scenes present unique challenges to motion-based video analysis. In th...
متن کاملنگاهی از منظر فلسفی به مساله کرامت انسان و ضرورت تحقیقات پزشکی
Philosophers of ethics and those who are involved in the debates concerning Medical Ethics have discussed the issue of human dignity and its cluster of meaning from different angles and have suggested many interesting points in this respect. However, a cursory glance at the published works in this field reveals that most of those writers who have contributed to this issue have either based thei...
متن کاملEffects of physical interference on life history shifts in Daphnia pulex.
Daphnia pulex were reared in 50 ml flasks, each containing 1, 20 or 40 individuals, which were serially connected with a 20-mum mesh screens between, in order to examine the effect of physical interference due to crowding on shifts of life history traits throughout two consecutive generations. A flow-through system, designed to maintain a sufficient food supply and minimize the accumulation of ...
متن کاملThe Biology and Psychology of Crowding in Man and Animals
Crowding is an ecologic and psychologic aspect of population density which produces a significant impact upon the behavior and physiology both of individuals and of social groups. In animal populations, an optimal level of crowding is often necessary for favorable social interactions, reproduction, and normal group organization. Beyond optimal levels, however, crowding may become a detrimental ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- EMBO reports
دوره 5 1 شماره
صفحات -
تاریخ انتشار 2004